2011
- Smedmark, J. E. E. and Bremer, B. 2011 Molecular systematics and incongruent gene trees of Urophylleae (Rubiaceae)
2010
- Smedmark, J. E. E., Eriksson, T. and Bremer, B. 2010 Divergence time uncertainty and historical biogeography reconstruction – an example from Urophylleae (Rubiaceae)
2009
- Rydin, C., K. Kainulainen, S. G. Razafimandimbison, J. E. E. Smedmark and B. Bremer. 2009 Deep divergences in the coffee family and the systematic position of Acranthera
2008
- Smedmark, J. E. E., C. Rydin, et al. 2008 A phylogeny of Urophylleae (Rubiaceae) based on rps16 intron data.
2007
- Smedmark, J. E. E. and A. A. Anderberg. 2007 Boreotropical migration explains hybridization between geographically distant lineages in the pantropical clade Sideroxyleae (Sapotaceae)
2006
- Smedmark, J. E. E. 2006 Recircumscription of Geum (Colurieae: Rosaceae)
- Smedmark, J. E. E. and T. Eriksson. 2006 Early stages of development shed light on fruit evolution in allopolyploid species of Geum (Rosaceae)
- Smedmark, J. E. E., U. Swenson and A. A. Anderberg. 2006 Accounting for variation of substitution rates through time in Bayesian phylogeny reconstruction of Sapotoideae (Sapotaceae)
2005
- Smedmark, J. E. E., T. Eriksson and B. Bremer. 2005 Allopolyploid evolution in Geinae (Colurieae : Rosaceae) - building reticulate species trees from bifurcating gene trees
2003
- Smedmark, J. E. E., T. Eriksson, R. C. Evans and C. S. Campbell. 2003 Ancient allopolyploid speciation in Geinae (Rosaceae): Evidence from nuclear granule-bound starch synthase (GBSSI) gene sequences
2002
- Smedmark, J. E. E. and T. Eriksson. 2002 Phylogenetic relationships of Geum (Rosaceae) and relatives inferred from the nrITS and trnL-trnF regions